C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec24 related gene family, member B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001079 Sec24b-001 ENSMUSG00000001052 10090 - 3:129982759-130060907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001079
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001079 6.232±0.60 7.304±1.42 5.277±0.07 8.261±4.39 7.231±4.54 7.255±1.70 1.616±0.49 4.239±0.45 2.146±0.78 7.676±1.85 1.587±0.63 12.144±4.14 10.419±2.21 20.864±8.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IGI neural tube closure
GO:0002093 IGI auditory receptor cell morphogenesis
GO:0003151 IMP outflow tract morphogenesis
GO:0005515 IPI protein binding
GO:0006886 IEA intracellular protein transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0021747 IGI cochlear nucleus development
GO:0030127 IDA COPII vesicle coat
GO:0030134 ISO ER to Golgi transport vesicle
GO:0035909 IMP aorta morphogenesis
GO:0060088 IGI auditory receptor cell stereocilium organization
GO:0060425 IMP lung morphogenesis
GO:0060463 IMP lung lobe morphogenesis
GO:0060982 IMP coronary artery morphogenesis
GO:0061156 IMP pulmonary artery morphogenesis
GO:0072358 IMP cardiovascular system development
GO:0090178 IMP regulation of establishment of planar polarity involved in neural tube closure
GO:1901301 IMP regulation of cargo loading into COPII-coated vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265175 SEC24B-001 protein_coding Homo_sapiens 0 2802
ENST00000399100 SEC24B-002 protein_coding Homo_sapiens 0 2614
ENST00000504968 SEC24B-003 protein_coding Homo_sapiens 0 2806

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