C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin M3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001166 Cnnm3-001 ENSMUSG00000001138 10090 + 1:36511867-36528237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001166 5.312±0.63 8.772±1.87 5.834±0.76 3.195±1.85 6.046±1.79 7.521±0.87 1.876±0.40 7.331±1.22 3.066±0.89 8.624±2.05 0.618±0.00 6.937±3.06 2.458±1.09 1.531±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O9 CIL_0003O9_0002 CGP 1:36471620-36528237
CIL_0002UB CIL_0002UB_0002 CGP 1:36511867-36535729

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030554 IEA adenyl nucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114069 cnnm4-201 protein_coding Danio_rerio 0 193
ENSDART00000132406 cnnm4-001 protein_coding Danio_rerio 0 193
ENST00000305510 CNNM3-001 protein_coding Homo_sapiens 0 2326
ENST00000377060 CNNM3-002 protein_coding Homo_sapiens 0 1334
ENST00000465224 CNNM3-004 retained_intron Homo_sapiens 0 399
ENST00000480035 CNNM3-006 processed_transcript Homo_sapiens 0 220
ENST00000494595 CNNM3-005 retained_intron Homo_sapiens 0 379

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