C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin and CBS domain divalent metal cation transport mediator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305510 CNNM3-001 ENSG00000168763 9606 + 2:96816250-96833911 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000305510
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000305510 11.101±0.00 5.218±0.00 1.356±0.00 2.479±1.40 3.947±0.00 11.654±0.00 2.488±0.00 5.414±1.99 8.384±0.00 4.440±3.77 10.836±4.72 6.565±2.82 7.440±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O9 CIL_0003O9_0001 CGP 2:96760902-96833911
CIL_0002UB CIL_0002UB_0001 CGP 2:96816245-96857934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006811 IEA ion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030554 IEA adenyl nucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001166 Cnnm3-001 protein_coding Mus_musculus 0 2326
ENSMUST00000097776 Cnnm3-002 protein_coding Mus_musculus 0 2202
ENSMUST00000135100 Cnnm3-004 retained_intron Mus_musculus 0 442
ENSMUST00000154225 Cnnm3-003 retained_intron Mus_musculus 0 433
ENSDART00000111766 CABZ01071058.1-201 protein_coding Danio_rerio 0 361
ENSMUST00000153128 Cnnm4-001 protein_coding Mus_musculus 0 298
ENSDART00000115310 CNNM4 (2 of 3)-201 protein_coding Danio_rerio 0 263
ENSDART00000087001 cnnm2a-001 protein_coding Danio_rerio 8e-19 100

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