C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001619 Ergic1-004 ENSMUSG00000001576 10090 + 17:26561545-26655174 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartLiverOvaryPlacentaTestisENSMUST00000001619
Transcript ID Adrenal Breast Heart Liver Ovary Placenta Testis
ENSMUST00000001619 26.003±0.00 38.718±13.77 6.463±0.00 13.002±1.81 31.996±16.05 7.474±1.37 15.583±10.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0002 VISTA 17:26208852-26810691
CIL_000915 CIL_000915_0002 VISTA 17:26527896-27128643

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393784 ERGIC1-002 protein_coding Homo_sapiens 0 1142
ENST00000519796 ERGIC1-012 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000519860 ERGIC1-006 processed_transcript Homo_sapiens 0 189
ENST00000520326 ERGIC1-009 protein_coding Homo_sapiens 0 488
ENST00000520642 ERGIC1-010 nonsense_mediated_decay Homo_sapiens 1.4013e-45 187
ENST00000521392 ERGIC1-011 processed_transcript Homo_sapiens 0 329
ENST00000523291 ERGIC1-013 protein_coding Homo_sapiens 0 490
ENST00000523366 ERGIC1-014 processed_transcript Homo_sapiens 1e-19 100
ENST00000523650 ERGIC1-015 processed_transcript Homo_sapiens 0 372

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