C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB34, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002128 Rab34-001 ENSMUSG00000002059 10090 + 11:78188430-78192188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002128
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002128 23.376±2.54 32.351±8.43 19.400±1.05 11.379±2.94 15.800±6.43 3.751±1.48 3.583±0.88 27.538±3.01 2.332±1.59 8.803±1.51 1.177±0.02 17.807±5.99 3.962±1.77 2.944±0.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005769 IDA early endosome
GO:0006184 IDA GTP catabolic process
GO:0006897 IDA endocytosis
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0019001 IDA guanyl nucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301043 RAB34-001 protein_coding Homo_sapiens 0 1347
ENST00000353676 RAB34-004 protein_coding Homo_sapiens 0 915
ENST00000395242 RAB34-006 protein_coding Homo_sapiens 0 1291
ENST00000395243 RAB34-005 protein_coding Homo_sapiens 0 1162
ENST00000395245 RAB34-018 protein_coding Homo_sapiens 0 1284
ENST00000412625 RAB34-009 protein_coding Homo_sapiens 0 822
ENST00000415040 RAB34-007 protein_coding Homo_sapiens 0 881
ENST00000419712 RAB34-019 protein_coding Homo_sapiens 0 682
ENST00000422279 RAB34-014 nonsense_mediated_decay Homo_sapiens 0 667
ENST00000430132 RAB34-010 protein_coding Homo_sapiens 0 747
ENST00000436730 RAB34-003 protein_coding Homo_sapiens 0 1005
ENST00000450529 RAB34-008 protein_coding Homo_sapiens 0 1072
ENST00000453384 RAB34-002 protein_coding Homo_sapiens 0 734
ENST00000474704 RAB34-017 retained_intron Homo_sapiens 0 241
ENST00000481501 RAB34-013 retained_intron Homo_sapiens 0 193
ENST00000482688 RAB34-012 retained_intron Homo_sapiens 0 377
ENST00000483554 RAB34-011 retained_intron Homo_sapiens 0 350
ENST00000496866 RAB34-015 retained_intron Homo_sapiens 9.94922e-44 180
ENST00000580843 RAB34-020 protein_coding Homo_sapiens 0 350
ENST00000582934 RAB34-021 protein_coding Homo_sapiens 0 350
ENST00000583538 RAB34-022 protein_coding Homo_sapiens 0 383

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