C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scinderin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002640 Scin-001 ENSMUSG00000002565 10090 - 12:40059773-40134228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002640
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002640 1.188±1.37 0.941±0.21 0.522±0.06 0.014±0.00 1.528±0.75 28.716±4.16 0.452±0.06 10.468±4.07 0.048±0.02 0.684±0.38 0.991±0.31 0.804±0.41 0.930±0.75 0.111±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055B CIL_00055B_0002 CGP 12:40005447-40134228

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008285 IEA negative regulation of cell proliferation
GO:0032330 ISS regulation of chondrocyte differentiation
GO:0043065 IEA positive regulation of apoptotic process
GO:0043234 IEA protein complex
GO:0045654 IEA positive regulation of megakaryocyte differentiation
GO:0051014 IEA actin filament severing
GO:0051693 IEA actin filament capping
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297029 SCIN-001 protein_coding Homo_sapiens 0 2405
ENST00000341757 SCIN-002 nonsense_mediated_decay Homo_sapiens 0 1738
ENST00000473722 SCIN-004 processed_transcript Homo_sapiens 0 592
ENST00000519209 SCIN-008 protein_coding Homo_sapiens 0 1875

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