C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scinderin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297029 SCIN-001 ENSG00000006747 9606 + 7:12570686-12653603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungOvaryPlacentaENST00000297029
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta
ENST00000297029 0.073±0.00 4.378±0.00 0.787±0.42 4.026±3.08 2.858±2.65 0.049±0.00 19.148±0.00 1.359±0.42 2.364±1.26 7.784±1.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 ISS phosphatidylserine binding
GO:0003779 ISS:IEA actin binding
GO:0005509 ISS calcium ion binding
GO:0005545 TAS 1-phosphatidylinositol binding
GO:0005546 ISS phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 ISS cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005938 ISS cell cortex
GO:0008285 IMP negative regulation of cell proliferation
GO:0017156 ISS calcium ion-dependent exocytosis
GO:0032330 ISS regulation of chondrocyte differentiation
GO:0043065 IMP positive regulation of apoptotic process
GO:0043234 IEA protein complex
GO:0045010 ISS actin nucleation
GO:0045654 IMP positive regulation of megakaryocyte differentiation
GO:0051014 IMP actin filament severing
GO:0051015 ISS actin filament binding
GO:0051047 ISS positive regulation of secretion
GO:0051693 IEA actin filament capping
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002640 Scin-001 protein_coding Mus_musculus 0 2405
ENSMUST00000078481 Scin-002 protein_coding Mus_musculus 0 1742

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