C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: migration and invasion enhancer 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002655 Mien1-001 ENSMUSG00000002580 10090 - 11:98437708-98438991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002655
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002655 42.765±8.97 45.859±4.39 58.602±1.91 54.065±9.59 34.504±4.78 25.259±0.90 75.318±11.63 44.247±13.03 32.622±1.99 21.774±3.65 47.999±10.77 45.296±7.29 29.260±6.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_0002PO CIL_0002PO_0002 CGP 11:98388677-98437716
CIL_0002PN CIL_0002PN_0002 CGP 11:98412470-98438991
CIL_0002E0 CIL_0002E0_0002 CGP 11:98437708-98455373

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0006915 IEA apoptotic process
GO:0008430 IEA selenium binding
GO:0030335 ISS positive regulation of cell migration
GO:0031235 ISS intrinsic component of the cytoplasmic side of the plasma membrane
GO:0043066 ISS negative regulation of apoptotic process
GO:0045454 IEA cell redox homeostasis
GO:0051491 ISS positive regulation of filopodium assembly
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394231 MIEN1-001 protein_coding Homo_sapiens 0 462
ENST00000469568 MIEN1-003 retained_intron Homo_sapiens 0 346
ENST00000474210 MIEN1-002 processed_transcript Homo_sapiens 0 217
ENST00000498164 MIEN1-004 retained_intron Homo_sapiens 0 235
ENST00000577810 MIEN1-005 protein_coding Homo_sapiens 0 331
ENST00000582963 MIEN1-006 retained_intron Homo_sapiens 3e-21 108

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