C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002E0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141741-ENSG00000141738 CGP 9606 17:39728496-39747291
GeneTranscriptPositionBiotype
ENSG00000141736 (ERBB2)
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2 		ENST00000269571 (ERBB2-008) 39700080-39728662 protein_coding
ENST00000406381 (ERBB2-201) 39694931-39728662 protein_coding
ENST00000445658 (ERBB2-004) 39699976-39728079 protein_coding
ENST00000541774 (ERBB2-202) 39699560-39728662 protein_coding
ENST00000578199 (ERBB2-003) 39688119-39717657 protein_coding
ENST00000578373 (ERBB2-007) 39700080-39728577 nonsense_mediated_decay
ENST00000578502 (ERBB2-015) 39710356-39715292 protein_coding
ENST00000578630 (ERBB2-016) 39716974-39723968 retained_intron
ENST00000578709 (ERBB2-012) 39703194-39708492 protein_coding
ENST00000580074 (ERBB2-018) 39717429-39725203 protein_coding
ENST00000582648 (ERBB2-011) 39700074-39716311 nonsense_mediated_decay
ENST00000582788 (ERBB2-006) 39700074-39717655 retained_intron
ENST00000582818 (ERBB2-019) 39716551-39723950 protein_coding
ENST00000583038 (ERBB2-010) 39707404-39726351 retained_intron
ENST00000583391 (ERBB2-014) 39709244-39710410 retained_intron
ENST00000584014 (ERBB2-002) 39688101-39695181 retained_intron
ENST00000584099 (ERBB2-013) 39706749-39709385 protein_coding
ENST00000584450 (ERBB2-005) 39700024-39728044 protein_coding
ENST00000584601 (ERBB2-001) 39687914-39728361 protein_coding
ENST00000584684 (ERBB2-017) 39717343-39720297 retained_intron
ENST00000584888 (ERBB2-020) 39728386-39730426 processed_transcript
ENST00000584908 (ERBB2-009) 39700227-39712330 retained_intron
ENSG00000141738 (GRB7)
growth factor receptor-bound protein 7 		ENST00000309156 (GRB7-001) 39737927-39747284 protein_coding
ENST00000394204 (GRB7-003) 39742252-39747003 protein_coding
ENST00000394209 (GRB7-009) 39739967-39746988 protein_coding
ENST00000394211 (GRB7-002) 39738337-39747285 protein_coding
ENST00000445327 (GRB7-006) 39738771-39747291 protein_coding
ENST00000461756 (GRB7-004) 39742934-39743612 retained_intron
ENST00000473071 (GRB7-007) 39743272-39744428 retained_intron
ENST00000485182 (GRB7-005) 39737949-39743054 retained_intron
ENST00000577695 (GRB7-011) 39737927-39742922 protein_coding
ENST00000578702 (GRB7-014) 39738353-39744103 processed_transcript
ENST00000583813 (GRB7-012) 39737962-39743281 nonsense_mediated_decay
ENST00000584053 (GRB7-013) 39740132-39742894 retained_intron
ENST00000584819 (GRB7-008) 39738306-39744604 retained_intron
ENST00000584853 (GRB7-010) 39737974-39738982 processed_transcript
ENSG00000141741 (MIEN1)
migration and invasion enhancer 1 		ENST00000394231 (MIEN1-001) 39729156-39730787 protein_coding
ENST00000469568 (MIEN1-003) 39729156-39730491 retained_intron
ENST00000474210 (MIEN1-002) 39729156-39730532 processed_transcript
ENST00000498164 (MIEN1-004) 39729160-39730516 retained_intron
ENST00000577810 (MIEN1-005) 39729158-39730510 protein_coding
ENST00000582963 (MIEN1-006) 39728496-39730494 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0002E0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002580-ENSMUSG00000019312 CGP 10090 11:98437708-98455373
GeneTranscriptPositionBiotype
ENSMUSG00000002580 (Mien1)
migration and invasion enhancer 1 		ENSMUST00000002655 (Mien1-001) 98437708-98438991 protein_coding
ENSMUSG00000019312 (Grb7)
growth factor receptor bound protein 7 		ENSMUST00000019456 (Grb7-001) 98446834-98455373 protein_coding
ENSMUST00000127914 (Grb7-006) 98447048-98455373 retained_intron
ENSMUST00000129034 (Grb7-003) 98453789-98455125 retained_intron
ENSMUST00000132771 (Grb7-002) 98446394-98451417 protein_coding
ENSMUST00000133419 (Grb7-004) 98451842-98453822 retained_intron
ENSMUST00000156328 (Grb7-005) 98447068-98455373 retained_intron
ENSMUSG00000062312 (Erbb2)
v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) 		ENSMUST00000058295 (Erbb2-001) 98412470-98437716 protein_coding
ENSMUST00000136032 (Erbb2-002) 98412493-98437077 processed_transcript
ENSMUST00000138066 (Erbb2-003) 98427080-98427572 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002E0_0001ENSG00000141736ENST00000269571ENST00000406381ENST00000541774ENST00000578373ENST00000580074ENST00000583038ENST00000583391ENST00000584450ENST00000584601ENSG00000141738ENST00000309156ENST00000394204ENST00000394209ENST00000394211ENST00000445327ENST00000461756ENST00000485182ENST00000578702ENST00000583813ENST00000584053ENST00000584819ENST00000584853ENSG00000141741ENST00000394231ENST00000469568ENST00000474210ENST00000577810CIL_0002E0_0002ENSMUSG00000002580ENSMUST00000002655ENSMUSG00000019312ENSMUST00000019456ENSMUST00000127914ENSMUST00000129034ENSMUST00000132771ENSMUST00000133419ENSMUST00000156328ENSMUSG00000062312ENSMUST00000058295ENSMUST00000136032
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141736 ENST00000269571 N/A N/A N/A N/A N/A N/A 3.548±2.54 N/A N/A 1.967±0.00 N/A 24.719±0.00 N/A N/A
ENST00000406381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.589±0.00
ENST00000445658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541774 N/A N/A 5.517±0.00 N/A 1.548±0.00 4.112±0.00 N/A 3.962±0.00 1.493±0.00 N/A 2.022±1.30 24.729±0.00 30.097±7.67 N/A
ENST00000578199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578373 6.135±0.00 5.196±0.00 N/A 4.055±0.00 21.456±0.00 17.939±0.00 14.076±0.00 21.114±0.00 3.162±0.00 33.275±0.00 3.600±2.55 31.615±0.00 25.072±0.00 N/A
ENST00000578502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580074 N/A N/A 26.973±0.00 N/A 10.131±0.00 15.291±0.00 5.826±0.00 7.780±0.00 9.025±0.00 9.729±0.00 3.931±0.00 44.626±0.00 N/A N/A
ENST00000582648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583038 N/A N/A N/A N/A N/A 1.542±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583391 N/A N/A N/A N/A N/A N/A 6.117±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000584014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584450 N/A N/A N/A N/A N/A N/A 0.976±0.00 N/A N/A N/A N/A 31.095±0.00 17.768±0.00 N/A
ENST00000584601 N/A N/A N/A N/A 1.320±0.00 N/A N/A N/A 0.980±0.00 N/A N/A N/A N/A 3.078±0.00
ENST00000584684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141738 ENST00000309156 N/A N/A N/A N/A 0.499±0.00 N/A N/A N/A 0.189±0.00 N/A N/A 4.406±3.12 4.854±0.82 N/A
ENST00000394204 N/A 0.083±0.00 N/A N/A 0.982±0.00 N/A 0.273±0.07 4.341±0.00 N/A N/A 0.014±0.00 0.970±0.00 N/A 0.792±0.00
ENST00000394209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.414±0.00 0.974±0.00 N/A
ENST00000394211 N/A N/A N/A N/A N/A N/A N/A 11.088±0.00 0.482±0.22 17.318±0.00 N/A 2.325±1.77 6.894±1.74 1.203±0.00
ENST00000445327 N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 0.895±0.00 N/A N/A N/A N/A
ENST00000461756 N/A N/A N/A N/A N/A 1.532±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485182 N/A N/A 1.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578702 N/A N/A N/A N/A N/A 1.254±0.00 N/A 1.605±0.00 2.576±0.00 N/A N/A 14.667±0.00 N/A N/A
ENST00000583813 N/A N/A N/A N/A N/A 1.408±0.11 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584053 N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000584819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.00
ENST00000584853 N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141741 ENST00000394231 28.161±0.00 14.915±0.00 N/A 22.911±15.85 N/A 35.566±0.00 N/A N/A N/A N/A N/A 55.699±1.36 62.972±1.80 35.538±10.75
ENST00000469568 N/A N/A N/A N/A N/A N/A 33.984±0.00 N/A 26.656±0.00 N/A 21.763±0.00 N/A N/A N/A
ENST00000474210 N/A 17.258±0.00 N/A N/A N/A N/A N/A N/A 16.346±0.00 N/A N/A N/A N/A 37.200±0.00
ENST00000498164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.169±0.00
ENST00000582963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002580 ENSMUST00000002655 42.765±8.97 45.859±4.39 58.602±1.91 54.065±9.59 34.504±4.78 N/A 25.259±0.90 75.318±11.63 44.247±13.03 32.622±1.99 21.774±3.65 47.999±10.77 45.296±7.29 29.260±6.49
ENSMUSG00000019312 ENSMUST00000019456 5.236±3.96 0.452±0.08 12.568±3.83 0.424±0.13 9.334±2.71 47.003±5.41 0.180±0.12 56.833±5.01 38.522±19.49 14.710±1.38 0.072±0.00 3.955±2.14 8.961±7.90 0.739±0.25
ENSMUST00000127914 1.296±0.80 N/A 5.387±1.04 0.059±0.00 2.408±0.36 8.725±1.35 N/A N/A 3.795±1.67 4.126±0.30 0.071±0.00 1.283±0.05 2.529±1.26 0.286±0.06
ENSMUST00000129034 0.521±0.00 N/A N/A N/A 3.612±1.25 N/A 0.145±0.02 N/A N/A N/A 0.117±0.05 2.131±0.02 N/A 0.435±0.00
ENSMUST00000132771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A
ENSMUST00000133419 N/A 0.374±0.10 N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A 0.135±0.00 N/A N/A N/A
ENSMUST00000156328 N/A N/A 3.208±0.00 N/A N/A N/A 0.047±0.02 N/A N/A N/A 0.053±0.02 1.501±0.00 0.849±0.00 0.178±0.00
ENSMUSG00000062312 ENSMUST00000058295 3.802±2.09 1.352±0.34 10.576±0.31 1.773±0.26 4.127±0.66 32.656±4.85 1.242±0.26 12.935±1.03 0.934±0.15 7.097±1.12 0.554±0.09 7.652±2.17 1.914±0.44 0.550±0.13
ENSMUST00000136032 3.328±0.79 1.683±0.66 5.488±1.03 1.636±0.16 4.027±2.33 22.276±7.02 N/A 8.106±2.78 N/A 5.798±1.48 0.431±0.00 5.369±1.52 1.992±0.56 0.571±0.00
ENSMUST00000138066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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