C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002PO_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000161395-ENSG00000141736 | CGP | 9606 | 17:39671122-39730426  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000141736  (ERBB2)v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2 |
ENST00000269571 (ERBB2-008)
|
39700080-39728662 | protein_coding | |
|
ENST00000406381 (ERBB2-201)
|
39694931-39728662 | protein_coding | ||
|
ENST00000445658 (ERBB2-004)
|
39699976-39728079 | protein_coding | ||
|
ENST00000541774 (ERBB2-202)
|
39699560-39728662 | protein_coding | ||
|
ENST00000578199 (ERBB2-003)
|
39688119-39717657 | protein_coding | ||
|
ENST00000578373 (ERBB2-007)
|
39700080-39728577 | nonsense_mediated_decay | ||
|
ENST00000578502 (ERBB2-015)
|
39710356-39715292 | protein_coding | ||
|
ENST00000578630 (ERBB2-016)
|
39716974-39723968 | retained_intron | ||
|
ENST00000578709 (ERBB2-012)
|
39703194-39708492 | protein_coding | ||
|
ENST00000580074 (ERBB2-018)
|
39717429-39725203 | protein_coding | ||
|
ENST00000582648 (ERBB2-011)
|
39700074-39716311 | nonsense_mediated_decay | ||
|
ENST00000582788 (ERBB2-006)
|
39700074-39717655 | retained_intron | ||
|
ENST00000582818 (ERBB2-019)
|
39716551-39723950 | protein_coding | ||
|
ENST00000583038 (ERBB2-010)
|
39707404-39726351 | retained_intron | ||
|
ENST00000583391 (ERBB2-014)
|
39709244-39710410 | retained_intron | ||
|
ENST00000584014 (ERBB2-002)
|
39688101-39695181 | retained_intron | ||
|
ENST00000584099 (ERBB2-013)
|
39706749-39709385 | protein_coding | ||
|
ENST00000584450 (ERBB2-005)
|
39700024-39728044 | protein_coding | ||
|
ENST00000584601 (ERBB2-001)
|
39687914-39728361 | protein_coding | ||
|
ENST00000584684 (ERBB2-017)
|
39717343-39720297 | retained_intron | ||
|
ENST00000584888 (ERBB2-020)
|
39728386-39730426 | processed_transcript | ||
|
ENST00000584908 (ERBB2-009)
|
39700227-39712330 | retained_intron | ||
|
ENSG00000141741 (MIEN1) migration and invasion enhancer 1 |
ENST00000394231 (MIEN1-001)
|
39729156-39730787 | protein_coding | |
|
ENST00000469568 (MIEN1-003)
|
39729156-39730491 | retained_intron | ||
|
ENST00000474210 (MIEN1-002)
|
39729156-39730532 | processed_transcript | ||
|
ENST00000498164 (MIEN1-004)
|
39729160-39730516 | retained_intron | ||
|
ENST00000577810 (MIEN1-005)
|
39729158-39730510 | protein_coding | ||
|
ENST00000582963 (MIEN1-006)
|
39728496-39730494 | retained_intron | ||
|
ENSG00000265178 (MIR4728) microRNA 4728 |
ENST00000580969 (MIR4728-201)
|
39726495-39726561 | miRNA | |
| CIL_0002PO_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000038208-ENSMUSG00000062312 | CGP | 10090 | 11:98388677-98437716 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000002580 (Mien1) migration and invasion enhancer 1 |
ENSMUST00000002655 (Mien1-001)
|
98437708-98438991 | protein_coding | |
|
ENSMUSG00000038208 (Pgap3) post-GPI attachment to proteins 3 |
ENSMUST00000041218 (Pgap3-002)
|
98388677-98392072 | processed_transcript | |
|
ENSMUST00000090827 (Pgap3-001)
|
98388677-98400490 | protein_coding | ||
|
ENSMUST00000125348 (Pgap3-003)
|
98398565-98400437 | processed_transcript | ||
|
ENSMUST00000128058 (Pgap3-004)
|
98391322-98400414 | processed_transcript | ||
|
ENSMUST00000128897 (Pgap3-005)
|
98389624-98400435 | protein_coding | ||
|
ENSMUSG00000062312 (Erbb2) v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) |
ENSMUST00000058295 (Erbb2-001)
|
98412470-98437716 | protein_coding | |
|
ENSMUST00000136032 (Erbb2-002)
|
98412493-98437077 | processed_transcript | ||
|
ENSMUST00000138066 (Erbb2-003)
|
98427080-98427572 | processed_transcript | ||
Expression Patterns
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