C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ephrin A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003154 Efna2-001 ENSMUSG00000003070 10090 + 10:80179482-80190010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003154
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003154 4.124±1.31 5.061±1.60 1.582±0.32 16.952±11.26 3.225±1.47 1.410±0.23 0.639±0.18 0.697±0.14 0.227±0.15 1.796±0.27 0.121±0.03 7.519±3.80 0.904±0.14 0.554±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QR CIL_0000QR_0002 CGP 10:80172944-80190010
CIL_0000QY CIL_0000QY_0002 CGP 10:80179482-80243903

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IBA plasma membrane
GO:0007411 IBA axon guidance
GO:0021772 IEA olfactory bulb development
GO:0030316 IDA osteoclast differentiation
GO:0031225 IEA anchored component of membrane
GO:0031594 IEA neuromuscular junction
GO:0043204 IEA perikaryon
GO:0046849 IDA bone remodeling
GO:0046875 IPI ephrin receptor binding
GO:0048013 IDA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215368 EFNA2-001 protein_coding Homo_sapiens 0 667

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