C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ephrin-A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000215368 EFNA2-001 ENSG00000099617 9606 + 19:1286154-1300237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENST00000215368
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENST00000215368 0.331±0.00 1.368±0.32 0.282±0.00 4.539±0.00 1.134±0.82 0.322±0.17 0.918±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QR CIL_0000QR_0001 CGP 19:1275438-1300237
CIL_0000QY CIL_0000QY_0001 CGP 19:1286154-1378431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IBA plasma membrane
GO:0007267 TAS cell-cell signaling
GO:0007411 IBA axon guidance
GO:0016020 IEA membrane
GO:0021772 IEA olfactory bulb development
GO:0030316 ISS osteoclast differentiation
GO:0031225 IEA anchored component of membrane
GO:0031594 IEA neuromuscular junction
GO:0043204 IEA perikaryon
GO:0046849 ISS bone remodeling
GO:0046875 IBA ephrin receptor binding
GO:0048013 ISS ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000027274 efna3a-201 protein_coding Danio_rerio 0.00000003 64
ENSDART00000147218 efna3a-001 protein_coding Danio_rerio 0.00000003 64
ENSMUST00000003154 Efna2-001 protein_coding Mus_musculus 0 667

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