C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003717 Abcb4-201 ENSMUSG00000042476 10090 + 5:8893721-8959225 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003717 0.174±0.05 0.108±0.04 0.059±0.02 0.294±0.22 1.423±1.21 0.212±0.05 2.410±0.92 0.148±0.06 21.773±8.63 0.186±0.07 23.513±2.68 0.212±0.08 0.099±0.08 0.209±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006855 IEA drug transmembrane transport
GO:0008559 IEA xenobiotic-transporting ATPase activity
GO:0016020 IDA membrane
GO:0016021 IBA integral component of membrane
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0042908 IEA xenobiotic transport
GO:0046581 IDA intercellular canaliculus
GO:0055085 IBA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265723 ABCB4-002 protein_coding Homo_sapiens 0 4311
ENST00000265724 ABCB1-001 protein_coding Homo_sapiens 0 1051
ENST00000358400 ABCB4-201 protein_coding Homo_sapiens 0 3142
ENST00000359206 ABCB4-001 protein_coding Homo_sapiens 0 4396
ENST00000453593 ABCB4-009 protein_coding Homo_sapiens 0 3121
ENST00000467079 ABCB4-006 retained_intron Homo_sapiens 0 372
ENST00000473795 ABCB4-004 retained_intron Homo_sapiens 0 484
ENST00000475929 ABCB1-009 processed_transcript Homo_sapiens 0 542
ENST00000488737 ABCB1-007 processed_transcript Homo_sapiens 0 935
ENST00000491360 ABCB1-010 retained_intron Homo_sapiens 0 350
ENST00000543898 ABCB1-201 protein_coding Homo_sapiens 0 1051
ENST00000622132 ABCB1-202 protein_coding Homo_sapiens 0 1051

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