C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265724 ABCB1-001 ENSG00000085563 9606 - 7:87503859-87713248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000265724
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000265724 0.694±0.00 7.962±0.00 2.404±0.16 2.014±1.60 1.992±1.61 0.383±0.00 5.202±1.33 1.350±0.28 1.043±0.36 0.786±0.34 1.305±0.18 0.690±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 IDA G2/M transition of mitotic cell cycle
GO:0005215 TAS transporter activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006810 TAS:IEA transport
GO:0006855 TAS drug transmembrane transport
GO:0008559 IEA xenobiotic-transporting ATPase activity
GO:0009986 IDA cell surface
GO:0016020 TAS membrane
GO:0016021 IBA:IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042493 TAS response to drug
GO:0042626 IBA:IEA ATPase activity, coupled to transmembrane movement of substances
GO:0042908 IEA xenobiotic transport
GO:0044281 TAS small molecule metabolic process
GO:0055085 IBA:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0072089 IMP stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047753 Abcb1a-001 protein_coding Mus_musculus 0 4172
ENSMUST00000009058 Abcb1b-201 protein_coding Mus_musculus 0 3452
ENSMUST00000126846 Abcb1a-002 retained_intron Mus_musculus 0 1903
ENSMUST00000003717 Abcb4-201 protein_coding Mus_musculus 0 1051
ENSMUST00000145232 Abcb1a-003 processed_transcript Mus_musculus 6e-31 141

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