C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453593 ABCB4-009 ENSG00000005471 9606 - 7:87402096-87475465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungOvaryPlacentaENST00000453593
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000453593 0.276±0.00 0.009±0.00 0.400±0.22 0.628±0.02 2.319±2.20 0.037±0.00 0.383±0.00 0.096±0.00 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052H CIL_00052H_0002 CGP 7:87345681-87480435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006629 TAS lipid metabolic process
GO:0006810 TAS:IEA transport
GO:0006855 IEA drug transmembrane transport
GO:0008559 IEA xenobiotic-transporting ATPase activity
GO:0016020 TAS membrane
GO:0016021 IBA:IEA integral component of membrane
GO:0016301 IEA kinase activity
GO:0016887 IEA ATPase activity
GO:0042493 TAS response to drug
GO:0042626 IBA:IEA ATPase activity, coupled to transmembrane movement of substances
GO:0042908 IEA xenobiotic transport
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055085 IBA:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003717 Abcb4-201 protein_coding Mus_musculus 0 3121
ENSMUST00000047753 Abcb1a-001 protein_coding Mus_musculus 0 1000
ENSMUST00000009058 Abcb1b-201 protein_coding Mus_musculus 0 874

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