C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine O-octanoyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003720 Crot-001 ENSMUSG00000003623 10090 - 5:8966033-8997324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003720 8.392±0.55 3.555±1.25 18.066±2.37 5.416±0.37 4.227±1.24 2.851±1.11 4.699±0.44 26.980±1.76 77.295±58.76 4.738±0.57 12.792±1.58 7.749±6.47 14.402±5.97 1.707±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005739 IDA mitochondrion
GO:0005777 IDA peroxisome
GO:0006091 IEA generation of precursor metabolites and energy
GO:0006631 IDA fatty acid metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0008458 IDA carnitine O-octanoyltransferase activity
GO:0009437 IDA carnitine metabolic process
GO:0015908 IDA fatty acid transport
GO:0015936 IDA coenzyme A metabolic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0051791 IEA medium-chain fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331536 CROT-001 protein_coding Homo_sapiens 0 1965
ENST00000412227 CROT-003 protein_coding Homo_sapiens 0 320
ENST00000419147 CROT-002 protein_coding Homo_sapiens 0 1764
ENST00000442291 CROT-004 protein_coding Homo_sapiens 0 1840
ENST00000488850 CROT-007 retained_intron Homo_sapiens 0 424

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