C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tryptophanyl tRNA synthetase 2 (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004343 Wars2-001 ENSMUSG00000004233 10090 + 3:99141068-99220203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004343
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004343 1.740±0.31 1.321±0.37 0.725±0.04 0.483±0.28 1.513±0.18 1.170±0.32 0.802±0.20 1.968±0.18 0.722±0.18 0.809±0.38 0.472±0.15 1.806±0.83 0.589±0.17 0.258±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RV CIL_0007RV_0002 VISTA 3:98932927-99536556
CIL_0008QB CIL_0008QB_0002 VISTA 3:98959779-99563564
CIL_0008CA CIL_0008CA_0002 VISTA 3:99030606-99631569

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IDA vasculogenesis
GO:0004830 IEA tryptophan-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006436 IEA tryptophanyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235521 WARS2-001 protein_coding Homo_sapiens 0 1168
ENST00000369426 WARS2-002 protein_coding Homo_sapiens 0 741
ENST00000495746 WARS2-005 processed_transcript Homo_sapiens 0 237
ENST00000497402 WARS2-004 processed_transcript Homo_sapiens 0 614

Loading