C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005067 Sgta-201 ENSMUSG00000004937 10090 - 10:81044075-81060178 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005067
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005067 76.058±14.74 154.945±7.98 28.881±4.60 90.269±14.45 71.092±21.33 57.832±14.94 24.057±3.33 55.666±15.49 28.333±9.45 55.929±8.55 30.116±3.44 67.681±29.96 66.777±29.27 54.460±16.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RR CIL_0001RR_0002 CGP 10:81028538-81060178
CIL_0001RQ CIL_0001RQ_0002 CGP 10:81044075-81082559

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0042803 ISA protein homodimerization activity
GO:0046982 ISA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221566 SGTA-001 protein_coding Homo_sapiens 0 848
ENST00000591984 SGTA-005 retained_intron Homo_sapiens 0 206

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