C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000221566 SGTA-001 ENSG00000104969 9606 - 19:2754714-2783371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221566 25.502±0.00 27.267±0.00 3.095±0.00 30.264±22.39 13.406±11.42 17.242±14.50 12.292±10.47 16.033±14.25 10.847±8.76 14.327±10.82 22.975±15.27 29.287±19.14 44.354±10.75 41.511±2.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RR CIL_0001RR_0001 CGP 19:2732204-2783371
CIL_0001RQ CIL_0001RQ_0001 CGP 19:2754714-2815807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0016032 IEA viral process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005067 Sgta-201 protein_coding Mus_musculus 0 848

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