C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO/sentrin specific peptidase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005336 Senp3-001 ENSMUSG00000005204 10090 - 11:69673115-69681846 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005336 19.502±3.82 15.297±3.53 20.511±3.23 17.862±8.65 15.306±2.42 14.521±2.13 7.187±0.25 11.836±1.35 12.625±7.13 17.609±1.59 12.134±0.78 14.566±3.70 34.622±18.25 15.020±6.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0019538 IDA protein metabolic process
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000122335 eif4a1a-201 protein_coding Danio_rerio 0 351
ENSDART00000121698 senp3b-001 protein_coding Danio_rerio 0 351
ENST00000321337 SENP3-001 protein_coding Homo_sapiens 0 2658
ENST00000429205 SENP3-201 protein_coding Homo_sapiens 0 2586
ENST00000580231 SENP3-005 protein_coding Homo_sapiens 0 712
ENST00000580997 SENP3-004 retained_intron Homo_sapiens 0 490
ENST00000581010 SENP3-002 retained_intron Homo_sapiens 0 448
ENST00000581093 SENP3-006 protein_coding Homo_sapiens 0 331
ENST00000582789 SENP3-007 protein_coding Homo_sapiens 0 322
ENST00000583277 SENP3-003 retained_intron Homo_sapiens 0 193
ENST00000610454 SENP3-008 protein_coding Homo_sapiens 0 662
ENST00000614237 SENP3-EIF4A1-001 nonsense_mediated_decay Homo_sapiens 0 2012
ENST00000619785 SENP3-009 nonsense_mediated_decay Homo_sapiens 0 797

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