C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nidogen 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005532 Nid1-201 ENSMUSG00000005397 10090 + 13:13437602-13512275 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005532
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005532 181.433±15.66 28.273±5.87 40.639±5.99 10.414±7.93 92.088±22.78 22.468±3.46 24.264±0.93 23.134±1.15 8.736±5.55 37.697±4.49 8.952±1.96 48.413±13.31 118.303±45.51 4.977±1.95

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005518 IDA collagen binding
GO:0005575 ND cellular_component
GO:0005576 TAS extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005604 IDA basement membrane
GO:0005605 IDA basal lamina
GO:0007160 IDA cell-matrix adhesion
GO:0008150 ND biological_process
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0032836 IMP glomerular basement membrane development
GO:0043236 IEA laminin binding
GO:0043237 IDA laminin-1 binding
GO:0043394 IEA proteoglycan binding
GO:0050840 IDA extracellular matrix binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264187 NID1-001 protein_coding Homo_sapiens 0 3701
ENST00000366595 NID1-002 protein_coding Homo_sapiens 0 2025

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