C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005714 Ube2m-001 ENSMUSG00000005575 10090 - 7:13035238-13038273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005714
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005714 22.006±4.28 22.588±4.67 24.837±0.44 54.322±11.29 16.030±2.17 19.709±2.51 18.045±5.22 14.025±2.52 16.334±9.92 12.827±0.88 33.117±4.45 25.846±6.12 19.947±7.73 77.994±5.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070T CIL_00070T_0002 CGP 7:13032006-13038275
CIL_0003CJ CIL_0003CJ_0002 CGP 7:13035120-13054764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006464 ISS cellular protein modification process
GO:0016567 IEA protein ubiquitination
GO:0018169 ISS ribosomal S6-glutamic acid ligase activity
GO:0019788 ISS NEDD8 ligase activity
GO:0043525 IEA positive regulation of neuron apoptotic process
GO:0045116 ISS protein neddylation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253023 UBE2M-001 protein_coding Homo_sapiens 0 1424
ENST00000568522 UBE2MP1-001 processed_pseudogene Homo_sapiens 0 767
ENST00000593801 UBE2M-004 retained_intron Homo_sapiens 0 344
ENST00000595957 UBE2M-006 protein_coding Homo_sapiens 0 732
ENST00000596985 UBE2M-005 protein_coding Homo_sapiens 0 363
ENST00000599829 UBE2M-003 retained_intron Homo_sapiens 0 206

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