C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00070T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130724-ENSG00000130725 CGP 9606 19:58551566-58558960
GeneTranscriptPositionBiotype
ENSG00000130724 (CHMP2A)
charged multivesicular body protein 2A 		ENST00000312547 (CHMP2A-001) 58551566-58555124 protein_coding
ENST00000596708 (CHMP2A-007) 58552055-58554960 protein_coding
ENST00000597209 (CHMP2A-008) 58552098-58554993 retained_intron
ENST00000597848 (CHMP2A-006) 58554046-58554990 protein_coding
ENST00000600006 (CHMP2A-009) 58551566-58554097 protein_coding
ENST00000600118 (CHMP2A-003) 58551566-58554638 protein_coding
ENST00000600804 (CHMP2A-005) 58553748-58555090 retained_intron
ENST00000601220 (CHMP2A-004) 58551566-58554973 protein_coding
ENSG00000130725 (UBE2M)
ubiquitin-conjugating enzyme E2M 		ENST00000253023 (UBE2M-001) 58555712-58558960 protein_coding
ENST00000593801 (UBE2M-004) 58556594-58557149 retained_intron
ENST00000595957 (UBE2M-006) 58556141-58558954 protein_coding
ENST00000596985 (UBE2M-005) 58556201-58557089 protein_coding
ENST00000599829 (UBE2M-003) 58556582-58557129 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_00070T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033916-ENSMUSG00000005575 CGP 10090 7:13032006-13038275
GeneTranscriptPositionBiotype
ENSMUSG00000005575 (Ube2m)
ubiquitin-conjugating enzyme E2M 		ENSMUST00000005714 (Ube2m-001) 13035238-13038273 protein_coding
ENSMUST00000123541 (Ube2m-007) 13035588-13036648 protein_coding
ENSMUST00000125964 (Ube2m-005) 13035329-13037627 protein_coding
ENSMUST00000126827 (Ube2m-006) 13036566-13037521 processed_transcript
ENSMUST00000131837 (Ube2m-004) 13035259-13037647 processed_transcript
ENSMUST00000138357 (Ube2m-003) 13035976-13037746 retained_intron
ENSMUST00000156389 (Ube2m-002) 13036442-13038273 protein_coding
ENSMUST00000165394 (Ube2m-201) 13035120-13038275 protein_coding
ENSMUSG00000033916 (Chmp2a)
charged multivesicular body protein 2A 		ENSMUST00000005711 (Chmp2a-201) 13032006-13034777 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070T_0001ENSG00000130724ENST00000312547ENST00000596708ENST00000597209ENST00000597848ENST00000600006ENST00000600118ENST00000600804ENST00000601220ENSG00000130725ENST00000253023ENST00000593801ENST00000595957ENST00000596985ENST00000599829CIL_00070T_0002ENSMUSG00000005575ENSMUST00000005714ENSMUST00000123541ENSMUST00000125964ENSMUST00000126827ENSMUST00000131837ENSMUST00000138357ENSMUST00000156389ENSMUST00000165394ENSMUSG00000033916ENSMUST00000005711
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070T_0001ENSG00000130724ENST00000312547ENST00000596708ENST00000597848ENST00000601220ENSG00000130725ENST00000253023ENST00000593801ENST00000595957CIL_00070T_0002ENSMUSG00000005575ENSMUST00000005714ENSMUST00000125964ENSMUST00000131837ENSMUST00000138357ENSMUST00000156389ENSMUST00000165394ENSMUSG00000033916ENSMUST00000005711
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130724 ENST00000312547 79.454±0.00 84.412±0.00 4.358±0.00 44.274±39.57 53.642±44.47 43.370±37.97 19.992±17.76 60.756±53.21 27.070±20.04 41.385±35.17 65.134±0.00 42.169±33.00 89.024±29.33 45.833±30.92
ENST00000596708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.858±0.00 51.542±0.00 35.142±0.00
ENST00000597209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 104.716±0.00 232.487±0.00 96.690±0.00
ENST00000600006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601220 31.576±0.00 20.739±0.00 4.516±0.00 19.067±3.98 15.793±0.00 11.144±0.00 9.493±2.14 15.735±1.39 14.076±11.15 14.915±0.00 23.343±7.24 15.768±10.77 29.740±7.18 17.200±2.33
ENSG00000130725 ENST00000253023 44.821±0.00 38.302±0.00 0.516±0.00 51.250±46.09 21.475±20.08 23.458±21.43 20.531±18.98 18.728±18.38 10.992±8.31 22.882±22.46 35.233±34.03 32.766±20.55 56.293±2.67 59.129±4.17
ENST00000593801 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.491±0.00 N/A N/A N/A N/A
ENST00000595957 N/A N/A 2.686±0.00 2.595±0.00 0.681±0.00 0.808±0.00 23.736±0.00 6.749±3.73 4.528±0.00 19.298±0.00 26.705±0.00 9.416±0.00 13.165±0.73 15.086±0.00
ENST00000596985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005575 ENSMUST00000005714 22.006±4.28 22.588±4.67 24.837±0.44 54.322±11.29 16.030±2.17 19.709±2.51 18.045±5.22 14.025±2.52 16.334±9.92 12.827±0.88 33.117±4.45 25.846±6.12 19.947±7.73 77.994±5.74
ENSMUST00000123541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125964 62.859±10.25 20.715±1.45 21.793±6.53 43.811±3.75 60.765±25.38 40.424±12.04 81.625±9.72 47.941±8.71 20.798±3.07 35.904±3.27 12.730±1.17 43.343±5.59 45.146±25.99 111.963±30.85
ENSMUST00000126827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131837 28.175±9.08 38.136±10.22 28.757±3.06 51.937±13.15 25.470±3.92 27.875±4.60 30.068±3.39 42.048±6.85 36.676±17.76 27.414±4.51 37.093±4.12 52.778±20.12 52.503±29.30 50.803±17.61
ENSMUST00000138357 N/A N/A N/A 101.878±0.00 30.472±0.00 N/A N/A N/A N/A N/A N/A 69.770±0.00 53.159±23.21 52.276±0.00
ENSMUST00000156389 N/A N/A N/A 112.651±0.00 N/A N/A N/A N/A N/A N/A N/A 67.391±37.65 136.137±0.00 55.633±0.00
ENSMUST00000165394 12.500±1.29 9.828±0.00 11.290±0.00 23.651±0.00 N/A N/A 13.732±3.19 14.797±4.02 9.027±3.19 N/A N/A 11.369±3.17 N/A N/A
ENSMUSG00000033916 ENSMUST00000005711 55.005±5.42 35.350±1.77 102.251±13.42 103.388±47.67 38.192±2.65 64.012±6.46 39.863±0.76 67.743±6.94 64.170±20.12 57.412±3.61 39.745±1.75 67.774±56.52 176.251±110.19 86.037±80.03

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