C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006029 Arhgap8-201 ENSMUSG00000078954 10090 + 15:84720052-84772207 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000006029
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000006029 1.187±0.68 0.437±0.00 0.805±0.28 1.076±0.16 0.332±0.06 0.732±0.20 5.374±1.48 1.264±0.46 15.476±13.02 0.875±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JU CIL_0003JU_0002 CGP 15:84669620-84772207
CIL_00054G CIL_00054G_0002 CGP 15:84720052-84856049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336963 ARHGAP8-003 protein_coding Homo_sapiens 0 874
ENST00000352766 PRR5-ARHGAP8-001 protein_coding Homo_sapiens 0 874
ENST00000356099 ARHGAP8-004 protein_coding Homo_sapiens 0 1158
ENST00000361473 PRR5-ARHGAP8-002 protein_coding Homo_sapiens 0 1158
ENST00000389772 ARHGAP8-005 nonsense_mediated_decay Homo_sapiens 0 983
ENST00000389773 PRR5-ARHGAP8-201 protein_coding Homo_sapiens 0 870
ENST00000389774 ARHGAP8-001 protein_coding Homo_sapiens 0 872
ENST00000447333 ARHGAP8-013 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000460809 ARHGAP8-002 retained_intron Homo_sapiens 0 872
ENST00000469342 ARHGAP8-016 retained_intron Homo_sapiens 0 292
ENST00000498310 ARHGAP8-014 retained_intron Homo_sapiens 0 418
ENST00000515632 PRR5-ARHGAP8-003 protein_coding Homo_sapiens 0 870
ENST00000517296 PRR5-ARHGAP8-202 protein_coding Homo_sapiens 0 872
ENST00000618676 PRR5-ARHGAP8-203 protein_coding Homo_sapiens 0 874

Loading