C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00054G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000241484-ENSG00000056487 CGP 9606 22:44752558-45009999
GeneTranscriptPositionBiotype
ENSG00000056487 (PHF21B)
PHD finger protein 21B 		ENST00000313237 (PHF21B-001) 44881162-45009700 protein_coding
ENST00000396103 (PHF21B-201) 44881162-45008993 protein_coding
ENST00000403565 (PHF21B-003) 44881162-45008993 protein_coding
ENST00000414269 (PHF21B-010) 44889773-45009999 protein_coding
ENST00000420689 (PHF21B-008) 44913916-45008986 protein_coding
ENST00000460507 (PHF21B-011) 44916455-44969083 processed_transcript
ENST00000462631 (PHF21B-009) 44968988-44971470 processed_transcript
ENST00000474327 (PHF21B-005) 44916595-45009592 processed_transcript
ENST00000490679 (PHF21B-007) 44916321-45009321 processed_transcript
ENST00000491522 (PHF21B-004) 45008153-45009612 retained_intron
ENST00000495348 (PHF21B-006) 44989122-45009547 processed_transcript
ENSG00000223730 (RP1-127B20.4)
 ENST00000431036 (RP1-127B20.4-002) 44901547-44902471 processed_transcript
ENST00000456225 (RP1-127B20.4-001) 44901592-44902430 transcribed_processed_pseudogene
ENSG00000230922 (RP4-753M9.1)
 ENST00000424580 (RP4-753M9.1-001) 45000565-45003619 sense_intronic
ENSG00000248405 (PRR5-ARHGAP8)
PRR5-ARHGAP8 readthrough 		ENST00000352766 (PRR5-ARHGAP8-001) 44702475-44862706 protein_coding
ENST00000361473 (PRR5-ARHGAP8-002) 44702233-44862671 protein_coding
ENST00000389773 (PRR5-ARHGAP8-201) 44702502-44862784 protein_coding
ENST00000495250 (PRR5-ARHGAP8-004) 44725246-44809801 retained_intron
ENST00000515632 (PRR5-ARHGAP8-003) 44725261-44862671 protein_coding
ENST00000517296 (PRR5-ARHGAP8-202) 44702502-44862784 protein_coding
ENST00000618676 (PRR5-ARHGAP8-203) 44702502-44862784 protein_coding

Homo sapiens Ensembl (GRCh38)

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Transcripts
Structures from Ensembl
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CIL_00054G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078954-ENSMUSG00000016624 CGP 10090 15:84720052-84856049
GeneTranscriptPositionBiotype
ENSMUSG00000016624 (Phf21b)
PHD finger protein 21B 		ENSMUST00000016768 (Phf21b-004) 84785381-84855110 protein_coding
ENSMUST00000159502 (Phf21b-005) 84787371-84791494 retained_intron
ENSMUST00000159939 (Phf21b-001) 84785384-84856049 protein_coding
ENSMUST00000160389 (Phf21b-006) 84794643-84803557 retained_intron
ENSMUST00000162044 (Phf21b-003) 84786134-84855751 nonsense_mediated_decay
ENSMUST00000162996 (Phf21b-007) 84785382-84787449 processed_transcript
ENSMUSG00000078954 (Arhgap8)
Rho GTPase activating protein 8 		ENSMUST00000006029 (Arhgap8-201) 84720052-84772207 protein_coding
ENSMUST00000100464 (Arhgap8-005) 84752780-84757186 processed_transcript
ENSMUST00000163312 (Arhgap8-004) 84741975-84765740 processed_transcript
ENSMUST00000167499 (Arhgap8-003) 84720083-84758900 retained_intron
ENSMUST00000168811 (Arhgap8-001) 84732892-84772204 protein_coding
ENSMUST00000169075 (Arhgap8-006) 84769886-84771940 retained_intron
ENSMUST00000172307 (Arhgap8-202) 84720052-84772207 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054G_0001ENSG00000056487ENST00000313237ENST00000396103ENST00000403565ENST00000414269ENST00000420689ENST00000460507ENST00000462631ENST00000474327ENST00000490679ENST00000491522ENST00000495348ENSG00000223730ENST00000431036ENST00000456225ENSG00000230922ENST00000424580ENSG00000248405ENST00000352766ENST00000361473ENST00000389773ENST00000495250ENST00000515632ENST00000517296ENST00000618676CIL_00054G_0002ENSMUSG00000016624ENSMUST00000016768ENSMUST00000159502ENSMUST00000159939ENSMUST00000160389ENSMUST00000162044ENSMUST00000162996ENSMUSG00000078954ENSMUST00000006029ENSMUST00000100464ENSMUST00000163312ENSMUST00000167499ENSMUST00000168811ENSMUST00000169075ENSMUST00000172307
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054G_0001ENSG00000056487ENST00000313237ENST00000396103ENST00000403565ENST00000414269ENST00000420689ENST00000462631ENST00000490679ENST00000491522ENST00000495348ENSG00000223730ENST00000431036ENST00000456225ENSG00000230922ENST00000424580ENSG00000248405ENST00000352766ENST00000361473ENST00000515632CIL_00054G_0002ENSMUSG00000016624ENSMUST00000016768ENSMUST00000159502ENSMUST00000159939ENSMUST00000160389ENSMUST00000162044ENSMUSG00000078954ENSMUST00000006029ENSMUST00000163312ENSMUST00000167499ENSMUST00000168811ENSMUST00000169075ENSMUST00000172307
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000056487 ENST00000313237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 0.005±0.00 1.328±0.87
ENST00000396103 0.014±0.00 0.020±0.00 N/A N/A 0.057±0.00 0.032±0.00 0.007±0.00 N/A N/A 0.032±0.00 0.013±0.00 0.422±0.54 0.005±0.00 N/A
ENST00000403565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 0.005±0.00 N/A
ENST00000414269 0.093±0.00 N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A 0.139±0.00 N/A N/A N/A
ENST00000420689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A
ENST00000460507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A
ENST00000474327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.179±0.00 N/A
ENST00000491522 N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.533±0.00 N/A N/A N/A
ENSG00000223730 ENST00000431036 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A
ENST00000456225 0.017±0.00 0.036±0.00 N/A N/A 0.018±0.00 0.051±0.00 0.016±0.00 0.036±0.00 N/A 0.017±0.00 0.015±0.00 0.067±0.00 N/A N/A
ENSG00000230922 ENST00000424580 N/A N/A N/A 0.014±0.00 N/A N/A N/A 0.038±0.00 0.079±0.00 N/A N/A 0.065±0.00 N/A 0.143±0.09
ENSG00000248405 ENST00000352766 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.528±0.00 0.076±0.00 N/A N/A N/A
ENST00000361473 N/A N/A N/A N/A N/A N/A N/A 6.284±0.00 N/A N/A N/A 6.998±0.00 N/A N/A
ENST00000389773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515632 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.636±0.00 N/A N/A N/A N/A
ENST00000517296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016624 ENSMUST00000016768 N/A 0.395±0.02 N/A 16.034±0.05 N/A 0.747±0.00 N/A N/A 0.069±0.02 N/A 0.071±0.02 N/A 0.140±0.10 0.437±0.12
ENSMUST00000159502 N/A N/A N/A N/A 0.501±0.00 N/A N/A N/A N/A N/A N/A N/A 0.203±0.00 2.700±0.00
ENSMUST00000159939 N/A 0.602±0.16 0.393±0.00 14.562±2.85 0.386±0.00 1.820±0.64 N/A 0.468±0.00 0.077±0.01 N/A 0.254±0.00 0.863±0.00 0.171±0.03 0.368±0.17
ENSMUST00000160389 N/A N/A N/A N/A 0.438±0.00 N/A N/A N/A 0.124±0.00 N/A 0.160±0.00 N/A 0.539±0.00 N/A
ENSMUST00000162044 1.057±0.00 N/A N/A N/A 0.166±0.00 N/A N/A 0.453±0.14 0.122±0.00 0.170±0.03 0.158±0.04 0.284±0.18 0.152±0.00 0.374±0.00
ENSMUST00000162996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078954 ENSMUST00000006029 1.187±0.68 0.437±0.00 N/A N/A 0.805±0.28 1.076±0.16 0.332±0.06 0.732±0.20 N/A 5.374±1.48 N/A 1.264±0.46 15.476±13.02 0.875±0.29
ENSMUST00000100464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163312 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A 0.072±0.03 N/A N/A N/A N/A 2.211±0.00
ENSMUST00000167499 0.152±0.08 0.044±0.00 N/A 0.026±0.01 0.194±0.06 N/A N/A 0.182±0.03 0.013±0.00 0.920±0.23 0.027±0.01 0.299±0.01 N/A N/A
ENSMUST00000168811 0.180±0.09 0.266±0.09 1.377±0.06 0.068±0.01 0.542±0.00 N/A 0.106±0.02 0.975±0.35 0.049±0.02 3.060±0.00 0.130±0.04 1.259±0.56 22.372±14.15 0.960±0.16
ENSMUST00000169075 0.435±0.00 0.675±0.00 N/A N/A 0.881±0.00 N/A 0.644±0.23 N/A N/A N/A 0.198±0.00 2.414±0.47 N/A N/A
ENSMUST00000172307 0.220±0.00 N/A N/A N/A 1.605±0.00 N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A

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