C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389772 ARHGAP8-005 ENSG00000241484 9606 + 22:44786457-44862784 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungOvaryTestisENST00000389772
Transcript ID Liver Lung Ovary Testis
ENST00000389772 0.411±0.00 0.482±0.00 13.512±0.00 2.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JU CIL_0003JU_0001 CGP 22:44668547-44862784
CIL_00054G CIL_00054G_0001 CGP 22:44752558-45009999

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006029 Arhgap8-201 protein_coding Mus_musculus 0 983
ENSMUST00000172307 Arhgap8-202 protein_coding Mus_musculus 0 983
ENSMUST00000168811 Arhgap8-001 protein_coding Mus_musculus 0 983
ENSMUST00000167499 Arhgap8-003 retained_intron Mus_musculus 0 394
ENSMUST00000163312 Arhgap8-004 processed_transcript Mus_musculus 0 326
ENSMUST00000169075 Arhgap8-006 retained_intron Mus_musculus 0 267

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