C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kaptin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006178 Kptn-001 ENSMUSG00000006021 10090 + 7:16119895-16127516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006178
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006178 13.233±1.72 12.231±3.54 10.030±1.03 11.476±0.79 8.985±3.12 10.005±1.89 12.261±1.05 10.454±1.94 8.177±2.85 11.083±1.14 5.614±0.84 10.892±4.31 3.799±1.37 5.097±2.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0002 VISTA 7:16104746-16706411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338134 KPTN-001 protein_coding Homo_sapiens 0 1245
ENST00000594139 KPTN-006 retained_intron Homo_sapiens 0 425
ENST00000594208 KPTN-002 nonsense_mediated_decay Homo_sapiens 0 675
ENST00000595484 KPTN-003 processed_transcript Homo_sapiens 0 636
ENST00000595554 KPTN-007 protein_coding Homo_sapiens 0 536
ENST00000598699 KPTN-008 processed_transcript Homo_sapiens 0 340
ENST00000600271 KPTN-005 protein_coding Homo_sapiens 0 726
ENST00000602193 KPTN-004 processed_transcript Homo_sapiens 0 636

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