C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 159
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006403 Ccdc159-201 ENSMUSG00000006241 10090 + 9:21927471-21935872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainMuscleOvaryPlacentaTestisENSMUST00000006403
Transcript ID Bladder Brain Muscle Ovary Placenta Testis
ENSMUST00000006403 2.487±0.26 3.183±0.61 0.500±0.00 4.713±0.00 0.453±0.00 20.972±2.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016R CIL_00016R_0003 CGP 9:21907491-21927535
CIL_0005P7 CIL_0005P7_0002 CGP 9:21921010-21935872
CIL_0003SY CIL_0003SY_0002 CGP 9:21927471-21948907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000458408 CCDC159-201 protein_coding Homo_sapiens 0 689
ENST00000586451 CCDC159-006 protein_coding Homo_sapiens 0 440
ENST00000587531 CCDC159-012 protein_coding Homo_sapiens 5e-23 111
ENST00000588592 CCDC159-011 protein_coding Homo_sapiens 0 418
ENST00000588790 CCDC159-001 protein_coding Homo_sapiens 0 689
ENST00000588821 CCDC159-004 retained_intron Homo_sapiens 1e-26 124
ENST00000589016 CCDC159-005 retained_intron Homo_sapiens 5e-21 106
ENST00000589477 CCDC159-015 retained_intron Homo_sapiens 0.000000000003 77
ENST00000590054 CCDC159-003 retained_intron Homo_sapiens 0 534
ENST00000590636 CCDC159-013 nonsense_mediated_decay Homo_sapiens 2e-17 94
ENST00000590919 CCDC159-010 nonsense_mediated_decay Homo_sapiens 5e-27 124
ENST00000592723 CCDC159-014 nonsense_mediated_decay Homo_sapiens 6e-27 124

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