C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific methyltransferase 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006470 Kmt2b-003 ENSMUSG00000006307 10090 - 7:30568858-30588717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006470
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006470 4.628±1.11 6.582±0.60 3.714±0.60 8.230±1.57 7.847±2.70 6.037±0.99 2.371±0.82 3.198±0.32 2.451±0.75 7.885±0.78 2.789±0.26 6.753±1.61 4.704±2.39 4.063±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006V0 CIL_0006V0_0002 CGP 7:30565427-30588726

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0003677 IEA DNA binding
GO:0005634 ISO nucleus
GO:0008270 IEA zinc ion binding
GO:0009994 IMP oocyte differentiation
GO:0016458 IMP gene silencing
GO:0030728 IMP ovulation
GO:0034968 IMP histone lysine methylation
GO:0035097 ISO histone methyltransferase complex
GO:0042800 ISO histone methyltransferase activity (H3-K4 specific)
GO:0051569 IMP regulation of histone H3-K4 methylation
GO:0080182 IMP histone H3-K4 trimethylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246532 IGFLR1-001 protein_coding Homo_sapiens 4e-24 117
ENST00000389506 KMT2A-015 protein_coding Homo_sapiens 0 368
ENST00000420124 KMT2B-001 protein_coding Homo_sapiens 0 9158
ENST00000525408 KMT2A-014 retained_intron Homo_sapiens 0 368
ENST00000527839 KMT2A-013 retained_intron Homo_sapiens 0 300
ENST00000534358 KMT2A-001 protein_coding Homo_sapiens 0 368
ENST00000585476 KMT2B-004 retained_intron Homo_sapiens 0 1382
ENST00000586308 KMT2B-005 retained_intron Homo_sapiens 0 717

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