C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006716 Wnt6-001 ENSMUSG00000033227 10090 + 1:74771892-74785322 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006716
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006716 0.653±0.55 4.705±1.50 0.708±0.53 1.128±0.61 0.993±0.59 0.780±0.35 0.063±0.05 0.133±0.08 0.029±0.02 0.202±0.03 0.163±0.08 15.693±5.66 0.580±0.34 2.214±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OQ CIL_0006OQ_0002 CGP 1:74738922-74785322
CIL_00041B CIL_00041B_0003 CGP 1:74771892-74804179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001658 IGI branching involved in ureteric bud morphogenesis
GO:0005102 TAS receptor binding
GO:0005109 IBA frizzled binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0005788 TAS endoplasmic reticulum lumen
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0009798 IDA axis specification
GO:0009887 TAS organ morphogenesis
GO:0009986 IDA cell surface
GO:0010628 IDA positive regulation of gene expression
GO:0016055 IDA Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0031012 IDA extracellular matrix
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0045165 IBA cell fate commitment
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0060684 IDA epithelial-mesenchymal cell signaling
GO:0070172 IEA positive regulation of tooth mineralization
GO:0072079 IDA nephron tubule formation
GO:0072080 IDA nephron tubule development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233948 WNT6-001 protein_coding Homo_sapiens 0 1421

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