C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006OQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115592-ENSG00000115596 CGP 9606 2:218822383-218874233
GeneTranscriptPositionBiotype
ENSG00000115592 (PRKAG3)
protein kinase, AMP-activated, gamma 3 non-catalytic subunit 		ENST00000233944 (PRKAG3-001) 218822383-218831816 nonsense_mediated_decay
ENST00000430489 (PRKAG3-005) 218830299-218831801 protein_coding
ENST00000439262 (PRKAG3-201) 218822383-218831791 protein_coding
ENST00000470307 (PRKAG3-003) 218824363-218831803 nonsense_mediated_decay
ENST00000490971 (PRKAG3-002) 218826635-218831803 retained_intron
ENST00000529249 (PRKAG3-006) 218823326-218832086 protein_coding
ENSG00000115596 (WNT6)
wingless-type MMTV integration site family, member 6 		ENST00000233948 (WNT6-001) 218859821-218874233 protein_coding
ENST00000486233 (WNT6-002) 218859965-218871739 processed_transcript
ENSG00000232625 (AC009974.11)
 ENST00000456160 (AC009974.11-001) 218841599-218842065 processed_pseudogene
CIL_0006OQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006542-ENSMUSG00000033227 CGP 10090 1:74738922-74785322
GeneTranscriptPositionBiotype
ENSMUSG00000006542 (Prkag3)
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit 		ENSMUST00000081636 (Prkag3-001) 74740205-74749221 protein_coding
ENSMUST00000113672 (Prkag3-002) 74740205-74748577 protein_coding
ENSMUST00000159728 (Prkag3-003) 74747518-74748904 nonsense_mediated_decay
ENSMUST00000160732 (Prkag3-004) 74738922-74748955 nonsense_mediated_decay
ENSMUST00000162093 (Prkag3-005) 74741467-74748867 nonsense_mediated_decay
ENSMUST00000188073 (Prkag3-201) 74738922-74748955 protein_coding
ENSMUSG00000033227 (Wnt6)
wingless-type MMTV integration site family, member 6 		ENSMUST00000006716 (Wnt6-001) 74771892-74785322 protein_coding
ENSMUST00000189544 (Wnt6-002) 74782439-74784602 retained_intron
ENSMUSG00000099472 (RP23-395C1.4)
predicted gene 29539 		ENSMUST00000188031 (RP23-395C1.4-001) 74774943-74777405 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OQ_0001ENSG00000115592ENST00000233944ENST00000430489ENST00000439262ENST00000470307ENST00000490971ENST00000529249ENSG00000115596ENST00000233948ENST00000486233ENSG00000232625ENST00000456160CIL_0006OQ_0002ENSMUSG00000006542ENSMUST00000081636ENSMUST00000113672ENSMUST00000159728ENSMUST00000160732ENSMUST00000162093ENSMUST00000188073ENSMUSG00000033227ENSMUST00000006716ENSMUST00000189544ENSMUSG00000099472ENSMUST00000188031
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OQ_0001ENSG00000115592ENST00000233944ENST00000439262ENST00000470307ENST00000529249ENSG00000115596ENST00000233948ENST00000486233ENSG00000232625ENST00000456160CIL_0006OQ_0002ENSMUSG00000006542ENSMUST00000081636ENSMUST00000113672ENSMUST00000159728ENSMUST00000162093ENSMUST00000188073ENSMUSG00000033227ENSMUST00000006716ENSMUST00000189544ENSMUSG00000099472ENSMUST00000188031
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115592 ENST00000233944 N/A N/A N/A N/A 0.886±0.00 N/A 0.002±0.00 N/A N/A N/A N/A 0.002±0.00 N/A N/A
ENST00000430489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439262 N/A 0.045±0.00 N/A 0.061±0.00 N/A N/A 0.037±0.03 N/A N/A N/A 8.510±1.31 0.009±0.00 N/A 0.230±0.00
ENST00000470307 N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000490971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A 0.090±0.00
ENSG00000115596 ENST00000233948 4.061±0.00 0.362±0.00 N/A 0.068±0.02 0.704±0.00 5.694±0.00 1.218±0.00 N/A 0.076±0.00 0.250±0.00 0.182±0.00 1.263±1.30 10.271±2.51 1.112±0.03
ENST00000486233 N/A N/A N/A N/A N/A 4.357±0.00 N/A N/A 0.416±0.00 N/A N/A N/A N/A N/A
ENSG00000232625 ENST00000456160 0.065±0.00 0.069±0.00 N/A N/A N/A 0.033±0.00 N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006542 ENSMUST00000081636 0.144±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.130±0.07 N/A 0.080±0.00
ENSMUST00000113672 0.548±0.48 0.168±0.00 0.094±0.00 N/A 0.074±0.00 0.093±0.02 0.163±0.00 N/A 0.008±0.01 N/A N/A 0.095±0.00 0.015±0.00 0.088±0.05
ENSMUST00000159728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A
ENSMUST00000160732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162093 N/A 0.106±0.05 N/A N/A N/A 0.123±0.04 N/A N/A 0.032±0.00 N/A N/A N/A 0.042±0.00 N/A
ENSMUST00000188073 1.407±1.32 0.082±0.02 0.248±0.12 0.145±0.11 3.920±3.09 0.138±0.07 0.544±0.14 0.735±0.36 0.051±0.03 1.761±1.02 78.541±6.71 0.267±0.15 0.091±0.08 0.204±0.09
ENSMUSG00000033227 ENSMUST00000006716 0.653±0.55 4.705±1.50 0.708±0.53 1.128±0.61 0.993±0.59 0.780±0.35 0.063±0.05 0.133±0.08 0.029±0.02 0.202±0.03 0.163±0.08 15.693±5.66 0.580±0.34 2.214±0.62
ENSMUST00000189544 0.601±0.43 1.192±0.00 0.867±0.01 1.172±0.41 0.591±0.38 0.951±0.20 0.142±0.06 0.152±0.05 0.077±0.03 0.094±0.02 0.186±0.00 10.224±2.41 0.628±0.13 N/A
ENSMUSG00000099472 ENSMUST00000188031 0.045±0.00 N/A 0.136±0.05 0.038±0.00 0.082±0.03 N/A N/A N/A N/A N/A N/A 0.327±0.09 0.057±0.04 0.115±0.05

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