C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 10A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006718 Wnt10a-001 ENSMUSG00000026167 10090 + 1:74791516-74804179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006718
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006718 0.048±0.03 0.554±0.10 0.444±0.04 0.845±0.94 1.300±0.19 0.037±0.03 0.009±0.00 0.433±0.06 0.010±0.01 0.447±0.42 0.095±0.06 0.901±0.39 0.187±0.22 0.080±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041B CIL_00041B_0003 CGP 1:74771892-74804179
CIL_0001I8 CIL_0001I8_0003 CGP 1:74791516-74857732

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IEA hair follicle development
GO:0005102 TAS receptor binding
GO:0005109 IBA frizzled binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0009887 TAS organ morphogenesis
GO:0010628 IDA positive regulation of gene expression
GO:0014033 IDA neural crest cell differentiation
GO:0016055 IBA Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0031069 IEA hair follicle morphogenesis
GO:0042476 IEA odontogenesis
GO:0042487 IDA regulation of odontogenesis of dentin-containing tooth
GO:0043586 IEA tongue development
GO:0043588 IEA skin development
GO:0045165 IBA cell fate commitment
GO:0048730 IEA epidermis morphogenesis
GO:0048733 IEA sebaceous gland development
GO:0071560 IEA cellular response to transforming growth factor beta stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258411 WNT10A-001 protein_coding Homo_sapiens 0 2013
ENST00000458582 WNT10A-002 protein_coding Homo_sapiens 0 505
ENST00000489887 WNT10A-004 processed_transcript Homo_sapiens 0.00000000000001 84

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