C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 10A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258411 WNT10A-001 ENSG00000135925 9606 + 2:218880363-218893931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLungOvaryPlacentaTestisENST00000258411
Transcript ID Adipose Adrenal Brain Colon Kidney Lung Ovary Placenta Testis
ENST00000258411 0.012±0.00 1.357±0.00 0.236±0.12 0.081±0.03 0.217±0.00 0.566±0.00 0.377±0.19 2.278±0.49 0.339±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041B CIL_00041B_0002 CGP 2:218859821-218899581
CIL_0001I8 CIL_0001I8_0002 CGP 2:218880363-218962162

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IMP hair follicle development
GO:0005102 IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005576 TAS:IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0010628 IEA positive regulation of gene expression
GO:0014033 IEA neural crest cell differentiation
GO:0016055 IBA:IEA Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0031069 IMP hair follicle morphogenesis
GO:0042476 IMP odontogenesis
GO:0042487 IEA regulation of odontogenesis of dentin-containing tooth
GO:0043586 IMP tongue development
GO:0043588 IMP skin development
GO:0045165 IBA cell fate commitment
GO:0048730 IMP epidermis morphogenesis
GO:0048733 IMP sebaceous gland development
GO:0071560 IEP cellular response to transforming growth factor beta stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006718 Wnt10a-001 protein_coding Mus_musculus 0 2013
ENSMUST00000187238 Wnt10a-002 protein_coding Mus_musculus 0 505
ENSDART00000007308 wnt10a-001 protein_coding Danio_rerio 0 416
ENSDART00000059974 wnt10b-001 protein_coding Danio_rerio 1e-31 143

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