C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006969 Krt23-001 ENSMUSG00000006777 10090 - 11:99477974-99493137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006969 1.467±1.53 0.323±0.00 1.538±0.10 0.022±0.01 2.076±0.44 3.006±0.94 0.426±0.12 1.721±0.28 1.239±1.12 12.891±2.55 0.116±0.06 0.569±0.22 1.838±1.20 0.219±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TN CIL_0000TN_0007 CGP 11:99428403-99493137
CIL_0000TM CIL_0000TM_0005 CGP 11:99477974-99521338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000209718 KRT23-001 protein_coding Homo_sapiens 0 1197
ENST00000436344 KRT23-005 protein_coding Homo_sapiens 0 878
ENST00000462312 KRT23-002 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000494691 KRT23-003 nonsense_mediated_decay Homo_sapiens 1e-20 104
ENST00000571258 KRT23-005 protein_coding Homo_sapiens 0 878
ENST00000571504 KRT23-002 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000574395 KRT23-003 nonsense_mediated_decay Homo_sapiens 1e-20 104
ENST00000574480 KRT23-001 protein_coding Homo_sapiens 0 1197
ENST00000579696 KRT23-006 retained_intron Homo_sapiens 0 1088
ENST00000581268 KRT23-010 protein_coding Homo_sapiens 0 462
ENST00000582754 KRT23-006 retained_intron Homo_sapiens 0 1088
ENST00000584517 KRT23-010 protein_coding Homo_sapiens 0 462

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