C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: four and a half LIM domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000008280 Fhl2-001 ENSMUSG00000008136 10090 - 1:43123074-43163961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000008280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000008280 6.334±3.66 13.779±1.22 49.476±11.11 16.758±16.00 3.271±0.64 20.120±2.11 102.889±2.06 15.106±1.02 1.420±1.17 3.101±1.07 2.287±0.93 29.994±9.17 53.934±22.90 1.338±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096O CIL_00096O_0002 VISTA 1:42588323-43189246
CIL_00010E CIL_00010E_0002 CGP 1:43098710-43196984
CIL_00010G CIL_00010G_0002 CGP 1:43123074-43570515

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0001649 IEP osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005925 IEA focal adhesion
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008134 ISS transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0009725 IEA response to hormone
GO:0015629 IEA actin cytoskeleton
GO:0030018 IEA Z disc
GO:0031430 IEA M band
GO:0042802 IEA identical protein binding
GO:0043066 ISS negative regulation of apoptotic process
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0055014 IEP atrial cardiac muscle cell development
GO:0055015 IEP ventricular cardiac muscle cell development
GO:0060347 IEP heart trabecula formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003898 fhl2b-201 protein_coding Danio_rerio 0 566
ENSDART00000124132 fhl2b-001 protein_coding Danio_rerio 0 566
ENSDART00000138078 fhl2b-002 retained_intron Danio_rerio 0 285
ENST00000322142 FHL2-004 protein_coding Homo_sapiens 0 974
ENST00000344213 FHL2-002 protein_coding Homo_sapiens 0 974
ENST00000358129 FHL2-201 protein_coding Homo_sapiens 0 616
ENST00000393352 FHL2-009 protein_coding Homo_sapiens 0 977
ENST00000393353 FHL2-003 protein_coding Homo_sapiens 0 974
ENST00000408995 FHL2-005 protein_coding Homo_sapiens 0 974
ENST00000409177 FHL2-006 protein_coding Homo_sapiens 0 976
ENST00000409807 FHL2-001 protein_coding Homo_sapiens 0 974
ENST00000452732 FHL2-008 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000530340 FHL2-010 nonsense_mediated_decay Homo_sapiens 0 977

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