C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009058 Abcb1b-201 ENSMUSG00000028970 10090 + 5:8798147-8866314 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009058 1.252±0.40 94.251±16.40 1.175±0.08 0.227±0.00 0.589±0.28 0.385±0.13 0.738±0.18 3.297±0.87 0.337±0.32 0.488±0.08 1.604±0.30 14.210±19.25 10.060±4.45 0.100±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006855 IEA drug transmembrane transport
GO:0008559 IEA xenobiotic-transporting ATPase activity
GO:0016021 IBA integral component of membrane
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0042908 IEA xenobiotic transport
GO:0046581 IDA intercellular canaliculus
GO:0055085 IBA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265723 ABCB4-002 protein_coding Homo_sapiens 0 874
ENST00000265724 ABCB1-001 protein_coding Homo_sapiens 0 3452
ENST00000358400 ABCB4-201 protein_coding Homo_sapiens 0 874
ENST00000359206 ABCB4-001 protein_coding Homo_sapiens 0 874
ENST00000453593 ABCB4-009 protein_coding Homo_sapiens 0 874
ENST00000467079 ABCB4-006 retained_intron Homo_sapiens 0 300
ENST00000475929 ABCB1-009 processed_transcript Homo_sapiens 0 756
ENST00000482527 ABCB1-005 retained_intron Homo_sapiens 0 542
ENST00000488737 ABCB1-007 processed_transcript Homo_sapiens 0 1384
ENST00000491360 ABCB1-010 retained_intron Homo_sapiens 0 411
ENST00000496821 ABCB1-006 processed_transcript Homo_sapiens 0 800
ENST00000543898 ABCB1-201 protein_coding Homo_sapiens 0 3175
ENST00000622132 ABCB1-202 protein_coding Homo_sapiens 0 3452

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