C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteinyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010899 Cars-001 ENSMUSG00000010755 10090 - 7:143557230-143600090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010899
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010899 1.793±0.31 1.817±0.75 1.297±0.07 2.774±0.27 1.515±0.46 1.855±0.77 0.939±0.25 0.792±0.15 2.323±0.46 1.739±0.33 1.838±0.24 3.358±0.95 1.455±0.12 2.856±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OC CIL_0006OC_0003 CGP 7:143513579-143600090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 ISS tRNA binding
GO:0004817 ISS cysteine-tRNA ligase activity
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005829 IBA cytosol
GO:0006423 ISS cysteinyl-tRNA aminoacylation
GO:0042803 IEA protein homodimerization activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278224 CARS-002 protein_coding Homo_sapiens 0 2307
ENST00000380525 CARS-004 protein_coding Homo_sapiens 0 2737
ENST00000397111 CARS-001 protein_coding Homo_sapiens 0 2344
ENST00000465240 CARS-010 processed_transcript Homo_sapiens 0 342
ENST00000465331 CARS-008 processed_transcript Homo_sapiens 0 575
ENST00000526890 CARS-014 retained_intron Homo_sapiens 0 828
ENST00000529772 CARS-016 protein_coding Homo_sapiens 0 2307
ENST00000531387 CARS-003 nonsense_mediated_decay Homo_sapiens 0 2261
ENST00000603171 CARSP1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000612826 AC001228.2-201 protein_coding Homo_sapiens 0 2763

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