C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcineurin-like EF hand protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000014221 Chp1-001 ENSMUSG00000014077 10090 + 2:119547697-119587027 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014221 194.046±81.14 121.087±7.74 60.205±4.24 22.209±2.75 160.637±38.35 131.095±20.33 36.794±2.98 73.731±7.87 94.853±48.47 67.599±1.85 27.004±1.01 51.200±21.12 39.789±12.20 12.470±5.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZB CIL_0005ZB_0002 CGP 2:119516505-119587027
CIL_000790 CIL_000790_0002 CGP 2:119547697-119618469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0001578 ISS microtubule bundle formation
GO:0001933 ISS negative regulation of protein phosphorylation
GO:0004860 IEA protein kinase inhibitor activity
GO:0005215 ISS transporter activity
GO:0005509 ISS calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005829 IEA cytosol
GO:0005886 ISS plasma membrane
GO:0005925 IEA focal adhesion
GO:0006469 ISS negative regulation of protein kinase activity
GO:0006611 ISS protein export from nucleus
GO:0008017 ISS microtubule binding
GO:0010923 ISS negative regulation of phosphatase activity
GO:0015630 ISS microtubule cytoskeleton
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0019900 ISS kinase binding
GO:0022406 ISS membrane docking
GO:0030133 ISS transport vesicle
GO:0031122 ISS cytoplasmic microtubule organization
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031953 ISS negative regulation of protein autophosphorylation
GO:0032088 ISS negative regulation of NF-kappaB transcription factor activity
GO:0032417 ISS positive regulation of sodium:proton antiporter activity
GO:0042308 ISS negative regulation of protein import into nucleus
GO:0045056 IEA transcytosis
GO:0048306 ISS calcium-dependent protein binding
GO:0050821 ISS protein stabilization
GO:0051222 ISS positive regulation of protein transport
GO:0051259 IEA protein oligomerization
GO:0051453 ISS regulation of intracellular pH
GO:0060050 ISS positive regulation of protein glycosylation
GO:0061024 ISS membrane organization
GO:0061025 ISS membrane fusion
GO:0070062 IEA extracellular vesicular exosome
GO:0070885 ISS negative regulation of calcineurin-NFAT signaling cascade
GO:0071468 ISS cellular response to acidic pH
GO:0090314 ISS positive regulation of protein targeting to membrane
GO:1901214 IEA regulation of neuron death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334660 CHP1-001 protein_coding Homo_sapiens 0 1151
ENST00000366273 RP11-288H12.3-001 transcribed_processed_pseudogene Homo_sapiens 0 593
ENST00000392151 CHP1-002 nonsense_mediated_decay Homo_sapiens 0 660
ENST00000558351 CHP1-009 processed_transcript Homo_sapiens 0 418
ENST00000560397 CHP1-006 protein_coding Homo_sapiens 0 706
ENST00000560411 CHP1-003 nonsense_mediated_decay Homo_sapiens 0 793
ENST00000560633 CHP1-005 processed_transcript Homo_sapiens 0 411
ENST00000560784 CHP1-008 nonsense_mediated_decay Homo_sapiens 0 675
ENST00000560965 CHP1-004 protein_coding Homo_sapiens 0 407
ENST00000561280 CHP1-007 processed_transcript Homo_sapiens 0 396
ENST00000569097 RP11-288H12.3-002 processed_transcript Homo_sapiens 0 782

Loading