C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, beta isoform
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015100 Ppp1cb-001 ENSMUSG00000014956 10090 + 5:32458974-32495523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015100
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015100 11.181±2.52 4.477±0.84 57.663±41.77 18.289±5.73 6.049±1.66 5.585±1.08 20.499±1.23 7.885±2.84 9.410±6.70 11.304±3.53 35.117±17.30 8.166±9.59 20.268±7.83 3.379±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Q CIL_00013Q_0002 CGP 5:32232708-32517433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000164 IEA protein phosphatase type 1 complex
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004722 IDA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005925 IEA focal adhesion
GO:0005977 IEA glycogen metabolic process
GO:0005979 IEA regulation of glycogen biosynthetic process
GO:0005981 IEA regulation of glycogen catabolic process
GO:0006470 IDA protein dephosphorylation
GO:0007049 IEA cell cycle
GO:0016791 IDA phosphatase activity
GO:0017018 ISS myosin phosphatase activity
GO:0019901 IEA protein kinase binding
GO:0030155 ISS regulation of cell adhesion
GO:0032922 IDA circadian regulation of gene expression
GO:0042587 IEA glycogen granule
GO:0042752 IMP regulation of circadian rhythm
GO:0043153 IMP entrainment of circadian clock by photoperiod
GO:0046872 IEA metal ion binding
GO:0050115 ISS myosin-light-chain-phosphatase activity
GO:0051301 IEA cell division
GO:0070062 IEA extracellular vesicular exosome
GO:0070688 IEA MLL5-L complex
GO:0072357 ISS PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296122 PPP1CB-003 protein_coding Homo_sapiens 0 2756
ENST00000358506 PPP1CB-201 protein_coding Homo_sapiens 0 2756
ENST00000395366 PPP1CB-001 protein_coding Homo_sapiens 0 2937
ENST00000418910 PPP1CB-009 protein_coding Homo_sapiens 0 226
ENST00000420282 PPP1CB-006 protein_coding Homo_sapiens 0 641
ENST00000427786 PPP1CB-008 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000441461 PPP1CB-005 protein_coding Homo_sapiens 0 706
ENST00000455580 PPP1CB-004 protein_coding Homo_sapiens 0 817
ENST00000462832 SPDYA-003 processed_transcript Homo_sapiens 0 717
ENST00000464273 PPP1CB-007 retained_intron Homo_sapiens 0 375

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