C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015160 Acsf3-201 ENSMUSG00000015016 10090 + 8:122775505-122817880 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0002 VISTA 8:122411841-123013825
CIL_0008HA CIL_0008HA_0002 VISTA 8:122617544-123223043
CIL_0006AJ CIL_0006AJ_0003 CGP 8:122628739-122817880
CIL_0006AI CIL_0006AI_0003 CGP 8:122775505-122867397

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006631 IEA fatty acid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0016878 IEA acid-thiol ligase activity
GO:0090409 IEA malonyl-CoA synthetase activity
GO:0090410 IEA malonate catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000082780 CR848706.1-201 protein_coding Danio_rerio 1.99965e-42 178
ENST00000317447 ACSF3-001 protein_coding Homo_sapiens 0 1382
ENST00000378345 ACSF3-002 protein_coding Homo_sapiens 0 1033
ENST00000406948 ACSF3-003 protein_coding Homo_sapiens 0 1382
ENST00000537116 ACSF3-005 processed_transcript Homo_sapiens 0 396
ENST00000537155 ACSF3-016 retained_intron Homo_sapiens 0 399
ENST00000542688 ACSF3-006 nonsense_mediated_decay Homo_sapiens 0 616
ENST00000544543 ACSF3-012 protein_coding Homo_sapiens 0 798
ENST00000562204 ACSF3-021 processed_transcript Homo_sapiens 0 287
ENST00000614302 ACSF3-201 protein_coding Homo_sapiens 0 1382

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