C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406948 ACSF3-003 ENSG00000176715 9606 + 16:89093883-89154589 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaENST00000406948
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta
ENST00000406948 1.330±0.00 0.641±0.00 1.040±0.00 1.162±0.00 1.188±0.98 2.739±0.09 4.728±0.00 1.793±0.00 3.007±2.34 4.433±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0006AJ CIL_0006AJ_0002 CGP 16:88874858-89155846
CIL_0008HA CIL_0008HA_0001 VISTA 16:89018329-89621235
CIL_0006AI CIL_0006AI_0002 CGP 16:89088375-89195492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006631 IDA fatty acid metabolic process
GO:0006633 IDA fatty acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0016878 IDA acid-thiol ligase activity
GO:0090409 IDA malonyl-CoA synthetase activity
GO:0090410 IDA malonate catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015160 Acsf3-201 protein_coding Mus_musculus 0 1382

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