C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542688 ACSF3-006 ENSG00000176715 9606 + 16:89098711-89154540 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000542688
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000542688 1.875±0.00 7.335±0.00 1.650±0.00 4.841±0.00 1.345±0.00 2.895±0.00 1.891±0.00 3.527±0.00 4.046±0.00 1.512±0.13 3.855±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0006AJ CIL_0006AJ_0002 CGP 16:88874858-89155846
CIL_0008HA CIL_0008HA_0001 VISTA 16:89018329-89621235
CIL_0006AI CIL_0006AI_0002 CGP 16:89088375-89195492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015160 Acsf3-201 protein_coding Mus_musculus 0 616

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