C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myotubularin related protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015358 Mtmr1-201 ENSMUSG00000015214 10090 + X:71364760-71419196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015358 2.108±1.16 1.853±0.28 12.141±1.14 3.527±2.05 1.833±1.40 2.099±1.07 0.716±0.02 2.962±0.29 2.154±0.62 2.538±0.70 3.448±2.33 2.202±1.21 2.490±0.95 0.549±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PJ CIL_0000PJ_0003 CGP X:71210767-71419196
CIL_0007GF CIL_0007GF_0003 CGP X:71364760-71492849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004438 IDA phosphatidylinositol-3-phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0046856 ISS phosphatidylinositol dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370387 MTMR1-004 retained_intron Homo_sapiens 0 749
ENST00000370390 MTMR1-013 protein_coding Homo_sapiens 0 2597
ENST00000429965 MTMR1-005 protein_coding Homo_sapiens 0 429
ENST00000434699 MTMR1-010 protein_coding Homo_sapiens 0 431
ENST00000436701 MTMR1-007 protein_coding Homo_sapiens 0 372
ENST00000438018 MTMR1-006 protein_coding Homo_sapiens 0 370
ENST00000439546 MTMR1-009 protein_coding Homo_sapiens 0 431
ENST00000445323 MTMR1-002 protein_coding Homo_sapiens 0 2519
ENST00000485376 MTMR1-001 nonsense_mediated_decay Homo_sapiens 0 2191
ENST00000488357 MTMR1-003 nonsense_mediated_decay Homo_sapiens 0 1035
ENST00000490316 MTMR1-008 protein_coding Homo_sapiens 0 375
ENST00000493480 MTMR1-011 retained_intron Homo_sapiens 0 448
ENST00000493995 MTMR1-012 protein_coding Homo_sapiens 0 726
ENST00000542156 MTMR1-201 protein_coding Homo_sapiens 0 1406

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