C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endonuclease G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015481 Endog-001 ENSMUSG00000015337 10090 + 2:30171493-30174069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000015481
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000015481 19.808±4.84 61.538±14.84 8.268±1.24 32.678±7.79 28.194±9.16 27.373±13.48 27.130±10.96 25.735±13.67 18.222±7.90 15.106±1.10 27.294±7.61 5.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L7 CIL_0005L7_0002 CGP 2:30133746-30174069
CIL_00017W CIL_00017W_0002 CGP 2:30171493-30178459

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0003676 IEA nucleic acid binding
GO:0004518 IBA nuclease activity
GO:0004519 IEA endonuclease activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0006308 TAS DNA catabolic process
GO:0006309 IMP apoptotic DNA fragmentation
GO:0034612 IMP response to tumor necrosis factor
GO:0043065 IMP positive regulation of apoptotic process
GO:0046677 IMP response to antibiotic
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361256 C9orf114-001 protein_coding Homo_sapiens 0 339
ENST00000372642 ENDOG-001 protein_coding Homo_sapiens 0 911
ENST00000467582 C9orf114-003 protein_coding Homo_sapiens 0 339
ENST00000622809 C9orf114-201 protein_coding Homo_sapiens 0 339

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