C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: endonuclease G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372642 ENDOG-001 ENSG00000167136 9606 + 9:128818474-128822677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungMusclePlacentaENST00000372642
Transcript ID Brain Breast Heart Kidney Liver Lung Muscle Placenta
ENST00000372642 1.678±0.00 6.009±0.00 5.602±4.77 13.242±0.00 9.614±0.00 4.406±0.00 7.996±6.17 12.990±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L7 CIL_0005L7_0001 CGP 9:128787204-128822677
CIL_00017W CIL_00017W_0001 CGP 9:128818474-128829821

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0003676 IEA nucleic acid binding
GO:0004518 IBA nuclease activity
GO:0004519 IEA endonuclease activity
GO:0005515 IPI protein binding
GO:0005739 IBA mitochondrion
GO:0006309 IBA apoptotic DNA fragmentation
GO:0006310 TAS DNA recombination
GO:0016787 IEA hydrolase activity
GO:0034612 IEA response to tumor necrosis factor
GO:0043065 IEA positive regulation of apoptotic process
GO:0046677 IEA response to antibiotic
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015481 Endog-001 protein_coding Mus_musculus 0 911
ENSMUST00000144093 D2Wsu81e-002 retained_intron Mus_musculus 0 339
ENSMUST00000100220 D2Wsu81e-001 protein_coding Mus_musculus 0 339
ENSMUST00000146466 D2Wsu81e-005 retained_intron Mus_musculus 0 339
ENSMUST00000136630 D2Wsu81e-006 retained_intron Mus_musculus 0 339
ENSMUST00000127309 D2Wsu81e-003 retained_intron Mus_musculus 0 339
ENSMUST00000142669 D2Wsu81e-004 retained_intron Mus_musculus 0 339

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