C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caseinolytic mitochondrial matrix peptidase chaperone subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015501 Clpx-001 ENSMUSG00000015357 10090 + 9:65294260-65330657 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015501 6.604±0.63 6.182±0.10 5.966±0.68 7.185±0.54 8.689±4.01 6.838±2.78 7.500±0.99 13.415±1.60 16.102±7.89 4.386±1.55 13.595±2.00 10.172±2.24 7.150±3.48 36.935±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004176 ISS ATP-dependent peptidase activity
GO:0005515 IPI protein binding
GO:0005524 IDA ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005759 ISS mitochondrial matrix
GO:0006200 ISS ATP catabolic process
GO:0006457 IEA protein folding
GO:0009368 ISS endopeptidase Clp complex
GO:0009841 IEA mitochondrial endopeptidase Clp complex
GO:0010952 IEA positive regulation of peptidase activity
GO:0016504 IEA peptidase activator activity
GO:0016887 IDA ATPase activity
GO:0042645 IEA mitochondrial nucleoid
GO:0046872 IEA metal ion binding
GO:0051082 IEA unfolded protein binding
GO:0051603 ISS proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300107 CLPX-001 protein_coding Homo_sapiens 0 2959
ENST00000558103 CLPX-006 retained_intron Homo_sapiens 0 302
ENST00000558958 CLPX-002 retained_intron Homo_sapiens 0 1537
ENST00000559152 CLPX-003 nonsense_mediated_decay Homo_sapiens 0 1319
ENST00000559218 CLPX-005 protein_coding Homo_sapiens 0 448
ENST00000560166 CLPX-007 retained_intron Homo_sapiens 0 623

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