C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 21B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016768 Phf21b-004 ENSMUSG00000016624 10090 - 15:84785381-84855110 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverMusclePlacentaTestisENSMUST00000016768
Transcript ID Adrenal Brain Colon Liver Muscle Placenta Testis
ENSMUST00000016768 0.395±0.02 16.034±0.05 0.747±0.00 0.069±0.02 0.071±0.02 0.140±0.10 0.437±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054G CIL_00054G_0002 CGP 15:84720052-84856049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313237 PHF21B-001 protein_coding Homo_sapiens 0 1059
ENST00000396103 PHF21B-201 protein_coding Homo_sapiens 0 1945
ENST00000403565 PHF21B-003 protein_coding Homo_sapiens 0 1637
ENST00000414269 PHF21B-010 protein_coding Homo_sapiens 0 542
ENST00000420689 PHF21B-008 protein_coding Homo_sapiens 0 939
ENST00000460507 PHF21B-011 processed_transcript Homo_sapiens 0 377
ENST00000474327 PHF21B-005 processed_transcript Homo_sapiens 0 198
ENST00000490679 PHF21B-007 processed_transcript Homo_sapiens 0 632
ENST00000491522 PHF21B-004 retained_intron Homo_sapiens 1e-25 121
ENST00000495348 PHF21B-006 processed_transcript Homo_sapiens 9e-26 121

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