C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 and cysteine rich domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017544 Stac2-001 ENSMUSG00000017400 10090 - 11:98036623-98053462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017544 0.755±0.28 0.274±0.11 0.100±0.04 3.878±3.95 1.847±0.60 0.253±0.09 0.078±0.06 0.073±0.06 0.014±0.01 0.343±0.10 0.097±0.10 0.235±0.09 0.420±0.29 2.747±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_0006QM CIL_0006QM_0002 CGP 11:98026710-98053462
CIL_0007D5 CIL_0007D5_0002 CGP 11:98036623-98150403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333461 STAC2-001 protein_coding Homo_sapiens 0 1831
ENST00000584501 STAC2-002 nonsense_mediated_decay Homo_sapiens 0 1114

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