C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD40 antigen
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017799 Cd40-001 ENSMUSG00000017652 10090 + 2:165055627-165072948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000017799
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000017799 0.304±0.14 0.178±0.03 0.243±0.04 0.163±0.06 0.675±0.00 0.258±0.09 0.195±0.00 0.232±0.05 0.116±0.05 0.107±0.00 0.137±0.05 0.098±0.01 0.064±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BI CIL_0007BI_0002 CGP 2:165000357-165072948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 IEA positive regulation of protein phosphorylation
GO:0002768 IDA immune response-regulating cell surface receptor signaling pathway
GO:0003823 IEA antigen binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006874 IMP cellular calcium ion homeostasis
GO:0006954 IEA inflammatory response
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0019899 IEA enzyme binding
GO:0030890 IDA positive regulation of B cell proliferation
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032735 IDA positive regulation of interleukin-12 production
GO:0032855 IEA positive regulation of Rac GTPase activity
GO:0035631 IDA CD40 receptor complex
GO:0042113 IDA B cell activation
GO:0042511 IEA positive regulation of tyrosine phosphorylation of Stat1 protein
GO:0043089 IEA positive regulation of Cdc42 GTPase activity
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043406 IEA positive regulation of MAP kinase activity
GO:0043491 IDA protein kinase B signaling
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048304 IDA positive regulation of isotype switching to IgG isotypes
GO:0050776 IDA regulation of immune response
GO:0051023 IDA regulation of immunoglobulin secretion
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity
GO:0051607 IDA defense response to virus
GO:0070062 IEA extracellular vesicular exosome
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071260 IEA cellular response to mechanical stimulus
GO:0090037 IEA positive regulation of protein kinase C signaling
GO:2000353 IEA positive regulation of endothelial cell apoptotic process

Homologs

No Homologs available.

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