C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junctophilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017961 Jph2-001 ENSMUSG00000017817 10090 - 2:163336242-163397949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017961 12.719±11.23 2.640±0.54 60.815±22.90 0.121±0.00 16.275±13.14 16.503±5.53 98.094±5.02 1.437±0.36 0.047±0.05 11.434±5.04 213.983±9.36 15.638±11.30 2.299±1.97 1.239±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044Q CIL_00044Q_0002 CGP 2:163203125-163397993
CIL_00044N CIL_00044N_0002 CGP 2:163336242-163424697

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 ISS phosphatidylserine binding
GO:0005515 IPI protein binding
GO:0005546 ISS phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 ISS phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005886 IEA plasma membrane
GO:0007204 IMP positive regulation of cytosolic calcium ion concentration
GO:0007275 IEA multicellular organismal development
GO:0010314 ISS phosphatidylinositol-5-phosphate binding
GO:0015278 IMP calcium-release channel activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016529 IDA sarcoplasmic reticulum
GO:0030018 IDA Z disc
GO:0030314 IMP junctional membrane complex
GO:0032266 ISS phosphatidylinositol-3-phosphate binding
GO:0055024 IMP regulation of cardiac muscle tissue development
GO:0055074 IEA calcium ion homeostasis
GO:0060316 IEA positive regulation of ryanodine-sensitive calcium-release channel activity
GO:0070273 ISS phosphatidylinositol-4-phosphate binding
GO:0070300 ISS phosphatidic acid binding
GO:0070588 IMP calcium ion transmembrane transport
GO:0080025 ISS phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000043429 jph2-001 protein_coding Danio_rerio 0 322
ENST00000215906 ASPHD2-001 protein_coding Homo_sapiens 0.0003 53
ENST00000342232 JPH1-001 protein_coding Homo_sapiens 3e-24 119
ENST00000342272 JPH2-002 protein_coding Homo_sapiens 0 534
ENST00000372980 JPH2-001 protein_coding Homo_sapiens 0 2130
ENST00000519947 JPH1-003 nonsense_mediated_decay Homo_sapiens 1e-24 119

Loading